leejisun9/bio_erd
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

[데이터 표준화 반영] 유전자, 오페론

Browse Source
This commit is contained in:
sohot8653
2025-10-27 17:13:54 +09:00
parent b7b4ec55e4
commit 7d3c07c52c
1 changed files with 78 additions and 78 deletions
Download Patch File Download Diff File Expand all files Collapse all files

156
.erd
View File

@@ -4,9 +4,9 @@
"settings": {
"width": 10000,
"height": 10000,
"scrollTop": -2304.7528,
"scrollLeft": -1259.4525,
"zoomLevel": 0.73,
"scrollTop": -672.4969,
"scrollLeft": -3517.0611,
"zoomLevel": 0.88,
"show": 431,
"database": 16,
"databaseName": "",
@@ -10657,7 +10657,7 @@
"ewShfvX7tGUcsp6owkG5b": {
"id": "ewShfvX7tGUcsp6owkG5b",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "gene_id",
"name": "GEN_ID",
"comment": "유전자 고유 ID (내부 PK)",
"dataType": "",
"default": "",
@@ -10670,34 +10670,34 @@
"widthDefault": 60
},
"meta": {
"updateAt": 1758779085964,
"updateAt": 1761533185238,
"createAt": 1758265613342
}
},
"0Dgbz2bSfIM24DzgRR3D1": {
"id": "0Dgbz2bSfIM24DzgRR3D1",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "organism",
"name": "ORGS_NME",
"comment": "생물 종명 (E. coli, C. glutamicum)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 63,
"widthComment": 176,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265626986,
"updateAt": 1761534973240,
"createAt": 1758265613343
}
},
"yJcylAqJSF6ElpcBOu5SO": {
"id": "yJcylAqJSF6ElpcBOu5SO",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "strain",
"name": "STRI_NME",
"comment": "균주명 (예: K-12 MG1655, ATCC 13032)",
"dataType": "",
"default": "",
@@ -10710,14 +10710,14 @@
"widthDefault": 60
},
"meta": {
"updateAt": 1758265630549,
"updateAt": 1761534882230,
"createAt": 1758265613343
}
},
"OuYzoiHzlIHz-EWWvOzLl": {
"id": "OuYzoiHzlIHz-EWWvOzLl",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "locus_tag",
"name": "LOCS_TG",
"comment": "locus tag (예: b0002, NCgl0001)",
"dataType": "",
"default": "",
@@ -10730,114 +10730,114 @@
"widthDefault": 60
},
"meta": {
"updateAt": 1758265634609,
"updateAt": 1761543481232,
"createAt": 1758265613343
}
},
"tWdjIruiBZUJ6o7Oo7aEb": {
"id": "tWdjIruiBZUJ6o7Oo7aEb",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "gene_name",
"name": "GEN_NM",
"comment": "유전자명 (예: thrA, gltA)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 63,
"widthName": 60,
"widthComment": 129,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265638742,
"updateAt": 1761543488216,
"createAt": 1758265613343
}
},
"5lvU7rf-reoXWZ5ryvvXX": {
"id": "5lvU7rf-reoXWZ5ryvvXX",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "product",
"name": "PROTN_PRODT_DDSR",
"comment": "단백질/산물 설명",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 117,
"widthComment": 94,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265642750,
"updateAt": 1761545659555,
"createAt": 1758265613343
}
},
"vEe2ofkUNCcgtHQWQ1XNw": {
"id": "vEe2ofkUNCcgtHQWQ1XNw",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "function_category",
"name": "FNCT_CTGY",
"comment": "기능 분류 (예: amino acid metabolism)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 97,
"widthName": 64,
"widthComment": 205,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265648704,
"updateAt": 1761545653946,
"createAt": 1758265613343
}
},
"8UDQO5RLZLyN2TrCwx4uf": {
"id": "8UDQO5RLZLyN2TrCwx4uf",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "go_terms",
"name": "GEN_ONTG_ID_LST",
"comment": "Gene Ontology ID 리스트",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 102,
"widthComment": 137,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265652319,
"updateAt": 1761545648684,
"createAt": 1758265613344
}
},
"H0mkkmQDIFokYAx1UzJpl": {
"id": "H0mkkmQDIFokYAx1UzJpl",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "ec_number",
"name": "ENZM_CTGY_NO",
"comment": "EC 번호 (효소 분류)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 91,
"widthComment": 105,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265655544,
"updateAt": 1761545928166,
"createAt": 1758265613344
}
},
"E-TetL4J4mbpTVqv5O0Wz": {
"id": "E-TetL4J4mbpTVqv5O0Wz",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "kegg_id",
"name": "KEGG_ID",
"comment": "KEGG 유전자/경로 ID",
"dataType": "",
"default": "",
@@ -10850,14 +10850,14 @@
"widthDefault": 60
},
"meta": {
"updateAt": 1758265660795,
"updateAt": 1761546202109,
"createAt": 1758265613344
}
},
"qcs1TKf1VtaXhXIVnEGBD": {
"id": "qcs1TKf1VtaXhXIVnEGBD",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "length_bp",
"name": "GEN_LEN",
"comment": "유전자 길이 (nt)",
"dataType": "",
"default": "",
@@ -10870,74 +10870,74 @@
"widthDefault": 60
},
"meta": {
"updateAt": 1758265664859,
"updateAt": 1761546349117,
"createAt": 1758265613344
}
},
"5k9WtVCzxxPlEY05SdNGm": {
"id": "5k9WtVCzxxPlEY05SdNGm",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "length_aa",
"name": "PROTN_LEN",
"comment": "단백질 길이 (aa)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 65,
"widthComment": 88,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265668686,
"updateAt": 1761546422729,
"createAt": 1758265613344
}
},
"WA5kS3x0JKjoQlEIbh2KR": {
"id": "WA5kS3x0JKjoQlEIbh2KR",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "start_pos",
"name": "GNM_STA_CRVL",
"comment": "시작 위치 (genome 좌표)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 87,
"widthComment": 135,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265672192,
"updateAt": 1761547610320,
"createAt": 1758265613344
}
},
"BUJxtwBKNhTwF3gMZPiOp": {
"id": "BUJxtwBKNhTwF3gMZPiOp",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "end_pos",
"name": "GNM_END_CRVL",
"comment": "끝 위치 (genome 좌표)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 91,
"widthComment": 123,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265676239,
"updateAt": 1761547614902,
"createAt": 1758265613344
}
},
"yJmiB_5bMcLzYSRd_Z503": {
"id": "yJmiB_5bMcLzYSRd_Z503",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "strand",
"name": "STRD_CD",
"comment": "+ / -",
"dataType": "",
"default": "",
@@ -10950,47 +10950,47 @@
"widthDefault": 60
},
"meta": {
"updateAt": 1758265679593,
"updateAt": 1761548199614,
"createAt": 1758265613344
}
},
"cl-uTYLjllq2rFWcH7-6V": {
"id": "cl-uTYLjllq2rFWcH7-6V",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "sequence_dna",
"name": "DNA_SQNC",
"comment": "DNA 서열",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 77,
"widthName": 64,
"widthComment": 60,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265682816,
"updateAt": 1761550499321,
"createAt": 1758265613344
}
},
"jzDqApGlht0oufvmfB4CM": {
"id": "jzDqApGlht0oufvmfB4CM",
"tableId": "3FcLtmPbd6vojr4u4r85n",
"name": "sequence_protein",
"name": "AMNAC_SQNC",
"comment": "아미노산 서열",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 95,
"widthName": 81,
"widthComment": 77,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758265686212,
"updateAt": 1761550503899,
"createAt": 1758265613344
}
},
@@ -11217,7 +11217,7 @@
"6_EsqM3fuJQiKGyGxX9hv": {
"id": "6_EsqM3fuJQiKGyGxX9hv",
"tableId": "BDdNJrZeO6Flkgar__xpA",
"name": "operon_id",
"name": "OPERN_ID",
"comment": "오페론 고유 ID (PK)",
"dataType": "",
"default": "",
@@ -11230,34 +11230,34 @@
"widthDefault": 60
},
"meta": {
"updateAt": 1758779113989,
"updateAt": 1761552639378,
"createAt": 1758266108438
}
},
"NXkbqprA70L7NHH_s9CfJ": {
"id": "NXkbqprA70L7NHH_s9CfJ",
"tableId": "BDdNJrZeO6Flkgar__xpA",
"name": "organism",
"name": "ORGN_SPCS_NM",
"comment": "생물 종명 (E. coli, C. glutamicum)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 92,
"widthComment": 176,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758266117949,
"updateAt": 1761552665707,
"createAt": 1758266108438
}
},
"E8qjKsXZ4ttijHTk_aTmw": {
"id": "E8qjKsXZ4ttijHTk_aTmw",
"tableId": "BDdNJrZeO6Flkgar__xpA",
"name": "strain",
"name": "STRN_NM",
"comment": "균주명 (예: K-12 MG1655, ATCC 13032)",
"dataType": "",
"default": "",
@@ -11270,74 +11270,74 @@
"widthDefault": 60
},
"meta": {
"updateAt": 1758266120677,
"updateAt": 1761552670373,
"createAt": 1758266108438
}
},
"rxRVUeB1dCdhMhTCbKy8r": {
"id": "rxRVUeB1dCdhMhTCbKy8r",
"tableId": "BDdNJrZeO6Flkgar__xpA",
"name": "operon_name",
"name": "OPERN_NM",
"comment": "오페론 이름 (예: lac operon)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 75,
"widthName": 65,
"widthComment": 150,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758266123769,
"updateAt": 1761552675024,
"createAt": 1758266108438
}
},
"-FwgBPP4InrdvIxLiHAGZ": {
"id": "-FwgBPP4InrdvIxLiHAGZ",
"tableId": "BDdNJrZeO6Flkgar__xpA",
"name": "start_pos",
"name": "GNM_STA_CRVL",
"comment": "게놈 상 시작 위치",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 87,
"widthComment": 96,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758266126965,
"updateAt": 1761552682164,
"createAt": 1758266108438
}
},
"dwOVFuqU2mu6qXtOpITHR": {
"id": "dwOVFuqU2mu6qXtOpITHR",
"tableId": "BDdNJrZeO6Flkgar__xpA",
"name": "end_pos",
"name": "GNM_END_CRVL",
"comment": "게놈 상 끝 위치",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 91,
"widthComment": 84,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758266130056,
"updateAt": 1761552686145,
"createAt": 1758266108438
}
},
"NKFkbOmPCP1wmyGDsRZXZ": {
"id": "NKFkbOmPCP1wmyGDsRZXZ",
"tableId": "BDdNJrZeO6Flkgar__xpA",
"name": "strand",
"name": "STRD_CD",
"comment": "전사 방향",
"dataType": "",
"default": "",
@@ -11350,27 +11350,27 @@
"widthDefault": 60
},
"meta": {
"updateAt": 1758266132745,
"updateAt": 1761552692292,
"createAt": 1758266108438
}
},
"s3Kz8kW8E5nbRjojtsXPv": {
"id": "s3Kz8kW8E5nbRjojtsXPv",
"tableId": "BDdNJrZeO6Flkgar__xpA",
"name": "gene_count",
"name": "GEN_CNT",
"comment": "포함된 유전자 수",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 64,
"widthName": 60,
"widthComment": 93,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758266135358,
"updateAt": 1761552733808,
"createAt": 1758266108438
}
},
@@ -11397,20 +11397,20 @@
"Ifb8SGsF6yDvYrrH-i9H4": {
"id": "Ifb8SGsF6yDvYrrH-i9H4",
"tableId": "BDdNJrZeO6Flkgar__xpA",
"name": "evidence",
"name": "OPERN_REF",
"comment": "오페론 예측/실험 근거 (예: DOOR, ProOpDB, 실험 논문)",
"dataType": "",
"default": "",
"options": 0,
"ui": {
"keys": 0,
"widthName": 60,
"widthName": 64,
"widthComment": 296,
"widthDataType": 60,
"widthDefault": 60
},
"meta": {
"updateAt": 1758266141653,
"updateAt": 1761552808862,
"createAt": 1758266108438
}
},
@@ -14986,7 +14986,7 @@
"columnIds": [
"ewShfvX7tGUcsp6owkG5b"
],
"x": 2742.0359,
"x": 2762.0359,
"y": 413.9674,
"direction": 2
},
@@ -15042,7 +15042,7 @@
"columnIds": [
"6_EsqM3fuJQiKGyGxX9hv"
],
"x": 4312.7961,
"x": 4321.2961,
"y": 558.9919,
"direction": 8
},
@@ -15070,7 +15070,7 @@
"columnIds": [
"6_EsqM3fuJQiKGyGxX9hv"
],
"x": 4620.7961,
"x": 4637.7961,
"y": 422.9919,
"direction": 2
},
@@ -15098,7 +15098,7 @@
"columnIds": [
"ewShfvX7tGUcsp6owkG5b"
],
"x": 2742.0359,
"x": 2762.0359,
"y": 645.9674,
"direction": 2
},
@@ -15126,7 +15126,7 @@
"columnIds": [
"ewShfvX7tGUcsp6owkG5b"
],
"x": 2329.5359,
"x": 2334.5359,
"y": 761.9674,
"direction": 8
},
@@ -15154,7 +15154,7 @@
"columnIds": [
"ewShfvX7tGUcsp6owkG5b"
],
"x": 2604.5359,
"x": 2619.5359,
"y": 761.9674,
"direction": 8
},